Biochem 508, Spring 2009

Perl Programming Supplement


Friday 2:00 - 3:00
ITC/ACHS, Biochemistry Library


Suggested Text:
Beginning Perl, 2nd ed., Lee, James, Apress (2004) ISBN 159059391X Amazon

Additional Texts:
Programming Perl 3rd Ed. Wall, Christiansen, Orwant (2000) O'Reilly ISBN 0-596000-27-8 Amazon

Other Texts:
Learning Perl 5th Ed. Schwartz, Phoenix, and Foy (2008) O'Reilly ISBN 0596520107 Amazon

Beginning Perl for Bioinformatics Tisdall (2001) O'Reilly ISBN 0-596-00080-4 FatBrain


Perl Tutorials

http://www.perl.com/pub/a/2008/04/23/a-beginners-introduction-to-perl-510.html - Excellent focussed introduction.

learn.perl.org - A WWW site devoted to learning Perl.


Mar1 Introduction to Editors, Perl, perldoc Exercise I: Print a random number [pdf]
8 Scalars, Arrays, Hashes, Exercise: Print a random DNA or protein sequence
22Control structures, Input/Output, Subroutines [pdf]
April5Regular Expressions, string manipulations [pdf]
12Modules - LWP get, CGI [pdf]
19Object oriented modules, BioPerl, LWP::UserAgent [pdf]
26Project Discussion


wrp@virginia.edu

Last modified: Monday, 05-Jan-2009 10:43:20 EST